=> Bootstrap dependency digest>=20211023: found digest-20220214 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Building for R-4.4.1 gmake[1]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/m4' gmake[1]: Nothing to be done for 'R'. gmake[1]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/m4' gmake[1]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/tools' gmake[1]: Nothing to be done for 'R'. gmake[1]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/tools' gmake[1]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/doc' gmake[2]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/doc/html' gmake[2]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/doc/html' gmake[2]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/doc/manual' gmake[2]: Nothing to be done for 'R'. gmake[2]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/doc/manual' gmake[1]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/doc' gmake[1]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/etc' gmake[1]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/etc' gmake[1]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/share' gmake[1]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/share' gmake[1]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src' gmake[2]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/scripts' creating src/scripts/R.fe gmake[3]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/scripts' mkdir ../../bin gmake[3]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/scripts' gmake[2]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/scripts' gmake[2]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/include' mkdir ../../include gmake[3]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/include/R_ext' mkdir ../../../include/R_ext gmake[3]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/include/R_ext' gmake[2]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/include' gmake[2]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/extra' gmake[3]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/extra/xdr' making xdr.d from xdr.c making xdr_float.d from xdr_float.c making xdr_mem.d from xdr_mem.c making xdr_stdio.d from xdr_stdio.c gmake[4]: Entering directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/extra/xdr' gcc -I. -I. -I../../../src/include -I../../../src/include -DPNG_NO_ASSEMBLER_CODE -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 -DHAVE_CONFIG_H -fopenmp -fPIC -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 -fvisibility=hidden -c xdr.c -o xdr.o gcc -I. -I. -I../../../src/include -I../../../src/include -DPNG_NO_ASSEMBLER_CODE -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 -DHAVE_CONFIG_H -fopenmp -fPIC -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 -fvisibility=hidden -c xdr_float.c -o xdr_float.o gcc -I. -I. -I../../../src/include -I../../../src/include -DPNG_NO_ASSEMBLER_CODE -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 -DHAVE_CONFIG_H -fopenmp -fPIC -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 -fvisibility=hidden -c xdr_mem.c -o xdr_mem.o distcc[7834] ERROR: compile xdr_mem.c on 10.0.20.122:3760 failed distcc[7834] (dcc_build_somewhere) Warning: remote compilation of 'xdr_mem.c' failed, retrying locally distcc[7834] Warning: failed to distribute xdr_mem.c to 10.0.20.122:3760, running locally instead xdr_mem.c:36:15: error: 'uint32_t' redeclared as different kind of symbol 36 | #define htonl ntohl | ^~~~~ In file included from xdr_mem.c:5: /usr/include/stdint.h:64:20: note: previous declaration of 'uint32_t' was here 64 | typedef __uint32_t uint32_t; | ^~~~~~~~ In file included from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/endian.h:70:1: error: 'uint32_t' redeclared as different kind of symbol 70 | uint32_t ntohl(uint32_t) __constfunc; | ^~~~~~~~ xdr_mem.c:36:15: note: previous declaration of 'uint32_t' was here 36 | #define htonl ntohl | ^~~~~ In file included from /usr/include/arm/bswap.h:7, from /usr/include/machine/bswap.h:3, from /usr/include/sys/endian.h:107, from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/aarch64/byte_swap.h:71:1: error: expected '=', ',', ';', 'asm' or '__attribute__' before '__byte_swap_u32_variable' 71 | __byte_swap_u32_variable(uint32_t v) | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/aarch64/byte_swap.h: In function '__byte_swap_u16_variable': /usr/include/aarch64/byte_swap.h:90:11: error: expected ';' before 'v32' 90 | uint32_t v32 = v; | ^~~~ | ; /usr/include/aarch64/byte_swap.h:91:35: error: 'v32' undeclared (first use in this function) 91 | __asm("rev16\t%w0, %w1" : "=r" (v32) : "0" (v32)); | ^~~ /usr/include/aarch64/byte_swap.h:91:35: note: each undeclared identifier is reported only once for each function it appears in In file included from /usr/include/arm/bswap.h:13, from /usr/include/machine/bswap.h:3, from /usr/include/sys/endian.h:107, from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/bswap.h: At top level: /usr/include/sys/bswap.h:20:1: error: unknown type name 'uint32_t' 20 | uint32_t bswap32(uint32_t) __RENAME(__bswap32) __constfunc; | ^~~~~~~~ In file included from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/endian.h:204:1: error: expected declaration specifiers or '...' before 'uint32_t' 204 | __GEN_ENDIAN_ENC(32, be) | ^~~~~~~~~~~~~~~~ /usr/include/sys/endian.h:207:1: error: expected declaration specifiers or '...' before 'uint32_t' 207 | __GEN_ENDIAN_ENC(32, le) | ^~~~~~~~~~~~~~~~ /usr/include/sys/endian.h:221:1: error: 'uint32_t' redeclared as different kind of symbol 221 | __GEN_ENDIAN_DEC(32, be) | ^~~~~~~~~~~~~~~~ In file included from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/endian.h:70:1: note: previous declaration of 'uint32_t' was here 70 | uint32_t ntohl(uint32_t) __constfunc; | ^~~~~~~~ In file included from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/endian.h:221:1: error: expected ',' or ';' before 'be32dec' 221 | __GEN_ENDIAN_DEC(32, be) | ^~~~~~~~~~~~~~~~ /usr/include/sys/endian.h:224:1: error: expected ',' or ';' before 'le32dec' 224 | __GEN_ENDIAN_DEC(32, le) | ^~~~~~~~~~~~~~~~ In file included from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/types.h:158:18: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'fixpt_t' 158 | typedef uint32_t fixpt_t; /* fixed point number */ | ^~~~~~~ /usr/include/sys/types.h:165:18: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'id_t' 165 | typedef uint32_t id_t; /* group id, process id or user id */ | ^~~~ /usr/include/sys/types.h:189:18: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'nlink_t' 189 | typedef uint32_t nlink_t; /* link count */ | ^~~~~~~ In file included from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/stdlib.h:278:1: error: unknown type name 'uint32_t' 278 | uint32_t arc4random(void); | ^~~~~~~~ /usr/include/stdlib.h:281:1: error: unknown type name 'uint32_t' 281 | uint32_t arc4random_uniform(uint32_t); | ^~~~~~~~ /usr/include/stdlib.h:331:55: error: expected declaration specifiers or '...' before 'uint32_t' 331 | void mi_vector_hash(const void * __restrict, size_t, uint32_t, | ^~~~~~~~ /usr/include/stdlib.h:332:6: error: expected declaration specifiers or '...' before 'uint32_t' 332 | uint32_t[3]); | ^~~~~~~~ In file included from ./rpc/types.h:75, from xdr_mem.c:90: /usr/include/sys/time.h: In function 'bintime2timespec': /usr/include/sys/time.h:180:30: error: called object 'uint32_t' is not a function or function pointer 180 | (long)((1000000000ULL * (uint32_t)(bt->frac >> 32)) >> 32); | ^ In file included from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/endian.h:224:1: note: declared here 224 | __GEN_ENDIAN_DEC(32, le) | ^~~~~~~~~~~~~~~~ In file included from ./rpc/types.h:75, from xdr_mem.c:90: /usr/include/sys/time.h: In function 'bintime2timeval': /usr/include/sys/time.h:197:34: error: called object 'uint32_t' is not a function or function pointer 197 | (suseconds_t)((1000000ULL * (uint32_t)(bt->frac >> 32)) >> 32); | ^ In file included from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: /usr/include/sys/endian.h:224:1: note: declared here 224 | __GEN_ENDIAN_DEC(32, le) | ^~~~~~~~~~~~~~~~ In file included from /usr/include/sys/select.h:65, from /usr/include/sys/time.h:319, from ./rpc/types.h:75, from xdr_mem.c:90: /usr/include/time.h: At top level: /usr/include/time.h:164:36: error: unknown type name 'id_t'; did you mean 'uid_t'? 164 | int clock_getcpuclockid2(idtype_t, id_t, clockid_t *); | ^~~~ | uid_t In file included from xdr_mem.c:91: ./rpc/xdr.h:249:33: error: expected declaration specifiers or '...' before 'uint32_t' 249 | extern bool_t xdr_u_long(XDR *, uint32_t *); | ^~~~~~~~ In file included from /usr/include/machine/endian.h:3, from /usr/include/sys/types.h:98, from /usr/include/stdlib.h:41, from ./rpc/types.h:64, from xdr_mem.c:90: xdr_mem.c: In function 'xdrmem_getlong': xdr_mem.c:146:23: error: called object 'uint32_t' is not a function or function pointer 146 | *lp = (int32_t)ntohl((uint32_t)(*((int32_t *)(xdrs->x_private)))); | ^ /usr/include/sys/endian.h:224:1: note: declared here 224 | __GEN_ENDIAN_DEC(32, le) | ^~~~~~~~~~~~~~~~ xdr_mem.c: In function 'xdrmem_putlong': xdr_mem.c:157:47: error: called object 'uint32_t' is not a function or function pointer 157 | *(int32_t *)xdrs->x_private = (int32_t)htonl((uint32_t)(*lp)); | ^ /usr/include/sys/endian.h:224:1: note: declared here 224 | __GEN_ENDIAN_DEC(32, le) | ^~~~~~~~~~~~~~~~ distcc[7834] ERROR: compile xdr_mem.c on localhost failed gmake[4]: *** [../../../Makeconf:129: xdr_mem.o] Error 1 gmake[4]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/extra/xdr' gmake[3]: *** [Makefile:44: R] Error 2 gmake[3]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/extra/xdr' gmake[2]: *** [Makefile:41: make.xdr] Error 2 gmake[2]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src/extra' gmake[1]: *** [Makefile:28: R] Error 1 gmake[1]: Leaving directory '/tmp/pkgbuild/math/R/work.aarch64eb/R-4.4.1/src' gmake: *** [Makefile:62: R] Error 1 *** Error code 2 Stop. make[1]: stopped in /usr/pkgsrc/math/R *** Error code 1 Stop. make: stopped in /usr/pkgsrc/math/R