=> Bootstrap dependency digest>=20010302: found digest-20190127
=> Checksum SHA1 OK for openbabel-3.0.0.tar.gz
=> Checksum RMD160 OK for openbabel-3.0.0.tar.gz
=> Checksum SHA512 OK for openbabel-3.0.0.tar.gz
===> Installing dependencies for openbabel-3.0.0nb3
==========================================================================
The supported build options for openbabel are:

	wx-gui

You can select which build options to use by setting PKG_DEFAULT_OPTIONS
or the following variable.  Its current value is shown:

	PKG_OPTIONS.openbabel (not defined)

==========================================================================
=> Tool dependency cmake>=2.8.1nb1: found cmake-3.17.0
=> Tool dependency pkgconf-[0-9]*: found pkgconf-1.6.0
=> Tool dependency distcc-[0-9]*: found distcc-3.3
=> Build dependency x11-links>=1.31: found x11-links-1.31
=> Build dependency eigen>=2.0beta3: found eigen-2.0.17nb1
=> Build dependency cwrappers>=20150314: found cwrappers-20180325
=> Full dependency cairo>=1.16.0: found cairo-1.16.0
=> Full dependency libxml2>=2.8.0nb2: found libxml2-2.9.10nb1
===> Overriding tools for openbabel-3.0.0nb3
===> Extracting for openbabel-3.0.0nb3
/bin/mkdir -p /tmp/pkgbuild/biology/openbabel/work.aarch64/build
===> Patching for openbabel-3.0.0nb3
=> Applying pkgsrc patches for openbabel-3.0.0nb3
===> Creating toolchain wrappers for openbabel-3.0.0nb3
===> Configuring for openbabel-3.0.0nb3
=> Generating pkg-config file for builtin expat package.
=> Generating pkg-config files for builtin xz package.
=> Adding run-time search paths to pkg-config files.
=> Fixing CMAKE_MODULE_PATH in CMakeLists.txt
-- The C compiler identification is GNU 7.4.0
-- The CXX compiler identification is GNU 7.4.0
-- Check for working C compiler: /tmp/pkgbuild/biology/openbabel/work.aarch64/.cwrapper/bin/gcc
-- Check for working C compiler: /tmp/pkgbuild/biology/openbabel/work.aarch64/.cwrapper/bin/gcc - works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /tmp/pkgbuild/biology/openbabel/work.aarch64/.cwrapper/bin/c++
-- Check for working CXX compiler: /tmp/pkgbuild/biology/openbabel/work.aarch64/.cwrapper/bin/c++ - works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt:12 (cmake_policy):
  The OLD behavior for policy CMP0042 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under
  specific short-term circumstances.  Projects should be ported to the NEW
  behavior and not rely on setting a policy to OLD.


-- Performing Test COMPILER_SUPPORTS_CXX11
-- Performing Test COMPILER_SUPPORTS_CXX11 - Success
-- Performing Test COMPILER_SUPPORTS_CXX0X
-- Performing Test COMPILER_SUPPORTS_CXX0X - Success
-- Using included inchi library.
-- Found LibXml2: /usr/pkg/lib/libxml2.so (found version "2.9.10") 
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.10") 
-- Could NOT find wxWidgets (missing: wxWidgets_LIBRARIES wxWidgets_INCLUDE_DIRS) 
-- Looking for conio.h
-- Looking for conio.h - not found
-- Looking for sys/time.h
-- Looking for sys/time.h - found
-- Looking for time.h
-- Looking for time.h - found
-- Looking for strings.h
-- Looking for strings.h - found
-- Looking for rpc/xdr.h
-- Looking for rpc/xdr.h - not found
-- Looking for regex.h
-- Looking for regex.h - found
-- Looking for C++ include sstream
-- Looking for C++ include sstream - found
-- Looking for rint
-- Looking for rint - not found
-- Looking for snprintf
-- Looking for snprintf - found
-- Looking for sranddev
-- Looking for sranddev - not found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strncasecmp
-- Looking for strncasecmp - found
-- Looking for dlopen in dl
-- Looking for dlopen in dl - not found
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of clock_t
-- Check size of clock_t - done
-- Performing Test SCANDIR_NEEDS_CONST
-- Performing Test SCANDIR_NEEDS_CONST - Failed
-- Performing Test HAVE_GCC_VISIBILITY
-- Performing Test HAVE_GCC_VISIBILITY - Success
-- Checking available shared pointer...
-- Performing Test HAVE_STD_SHARED_PTR
-- Performing Test HAVE_STD_SHARED_PTR - Success
-- Performing Test HAVE_STD_TR1_SHARED_PTR
-- Performing Test HAVE_STD_TR1_SHARED_PTR - Failed
-- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER
-- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER - Success
-- Use std::shared_ptr in memory
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) 
-- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
-- Found Eigen2: /usr/pkg/include/eigen2 (Required is at least version "2.0.0") 
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR) 
-- Maestro formats will NOT be supported. Please install Boost to enable Maestro formats.
-- Found PkgConfig: /tmp/pkgbuild/biology/openbabel/work.aarch64/.tools/bin/pkg-config (found version "1.6.0") 
-- Could NOT find RapidJSON (missing: RAPIDJSON_INCLUDE_DIRS) (Required is at least version "1.1.0")
-- Downloaded RapidJSON to /tmp/pkgbuild/biology/openbabel/work.aarch64/openbabel-openbabel-3-0-0/external/rapidjson-1.1.0.
-- JSON formats will be supported. Using RapidJSON 1.1.0 at /tmp/pkgbuild/biology/openbabel/work.aarch64/openbabel-openbabel-3-0-0/external/rapidjson-1.1.0/include
-- Checking for module 'cairo'
--   Found cairo, version 1.16.0
-- Found Cairo: /usr/pkg/lib/libcairo.so  
-- Cairo found. PNG output will be supported.
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR system) (Required is at least version "1.45.0")
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) 
-- Looking for getopt
-- Looking for getopt - found
-- GUI will not be built
-- Found PythonInterp: /usr/pkg/bin/python3.7 (found version "3.7.7") 
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    LLVM_CONFIG


-- Build files have been written to: /tmp/pkgbuild/biology/openbabel/work.aarch64/build
=> Rewrite cmake Dependencies files