=> Bootstrap dependency digest>=20010302: found digest-20190127
===> Skipping vulnerability checks.
WARNING: No /var/db/pkg/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'.
===> Installing for py36-gdal-3.0.4nb4
=> Generating pre-install file lists
=> Creating installation directories
env PYTHONPATH=/usr/pkg/lib/python3.6/site-packages${PYTHONPATH:+:$PYTHONPATH} \
	python setup.py install --root=/tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir --prefix=/usr/pkg
WARNING: "CXX=/bin/sh /tmp/pkgbuild/geography/py-gdal/work.alpha/gdal-3.0.4/libtool --mode=compile --silent --tag=CXX c++" was defined in the environment and contains more than one word. Unsetting it since that is incompatible of distutils
WARNING: "CC=/bin/sh /tmp/pkgbuild/geography/py-gdal/work.alpha/gdal-3.0.4/libtool --mode=compile --silent --tag=CC gcc" was defined in the environment and contains more than one word. Unsetting it since that is incompatible of distutils
WARNING: numpy not available!  Array support will not be enabled
running install
running build
running build_py
running build_ext
gcc -pthread -DNDEBUG -O2 -mieee -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -O2 -mieee -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -I/usr/include/krb5 -I/usr/pkg/include/python3.6 -Wall -Wdeclaration-after-statement -Wextra -Winit-self -Wunused-parameter -Wmissing-prototypes -Wmissing-declarations -Wformat -Werror=format-security -Wno-format-nonliteral -Wlogical-op -Wshadow -Werror=vla -Wdeclaration-after-statement -Wdate-time -Wnull-dereference -Wduplicated-cond -Wfloat-conversion -std=gnu89 -DGNM_ENABLED -DPNG_NO_ASSEMBLER_CODE -I/usr/pkg/include -I/usr/include -I/usr/include/krb5 -I/usr/pkg/include/python3.6 -I/tmp/pkgbuild/geography/py-gdal/work.alpha/gdal-3.0.4/port -I/usr/pkg/include -I/usr/pkg/include/openjpeg-2.3 -I/usr/pkg/include -I/usr/pkg/include -I/usr/include -I/usr/include/include -DGDAL_COMPILATION -DHAVE_XERCES -I/usr/pkg/include -I/usr/pkg/include/xercesc -DPNG_NO_ASSEMBLER_CODE -I/usr/pkg/include -I/usr/include -I/usr/include/krb5 -I/usr/pkg/include/python3.6 -I/tmp/pkgbuild/geography/py-gdal/work.alpha/gdal-3.0.4/port -I/usr/pkg/include -I/usr/pkg/include/openjpeg-2.3 -I/usr/pkg/include -I/usr/pkg/include -I/usr/include -I/usr/include/include -DGDAL_COMPILATION -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/usr/pkg/include/python3.6 -I. -I/usr/pkg/include -c gdal_python_cxx11_test.cpp -o gdal_python_cxx11_test.o
running build_scripts
running install_lib
creating /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib
creating /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6
creating /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages
copying build/lib.netbsd-9.0-alpha-3.6/gdal.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages
copying build/lib.netbsd-9.0-alpha-3.6/ogr.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages
copying build/lib.netbsd-9.0-alpha-3.6/osr.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages
copying build/lib.netbsd-9.0-alpha-3.6/gdalconst.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages
creating /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/gdal_array.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/gdalnumeric.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/gdalconst.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/gnm.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/gdal.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/ogr.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/osr.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/__init__.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/_gdal.so -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/_gdalconst.so -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/_osr.so -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/_ogr.so -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
copying build/lib.netbsd-9.0-alpha-3.6/osgeo/_gnm.so -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/gdal.py to gdal.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/ogr.py to ogr.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osr.py to osr.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/gdalconst.py to gdalconst.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/gdal_array.py to gdal_array.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/gdalnumeric.py to gdalnumeric.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/gdalconst.py to gdalconst.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/gnm.py to gnm.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/gdal.py to gdal.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/ogr.py to ogr.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/osr.py to osr.cpython-36.pyc
byte-compiling /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/__init__.py to __init__.cpython-36.pyc
running install_egg_info
running egg_info
creating GDAL.egg-info
writing GDAL.egg-info/PKG-INFO
writing dependency_links to GDAL.egg-info/dependency_links.txt
writing top-level names to GDAL.egg-info/top_level.txt
writing manifest file 'GDAL.egg-info/SOURCES.txt'
reading manifest file 'GDAL.egg-info/SOURCES.txt'
writing manifest file 'GDAL.egg-info/SOURCES.txt'
Copying GDAL.egg-info to /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/GDAL-3.0.4-py3.6.egg-info
running install_scripts
copying build/scripts-3.6/gdal_proximity.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdalchksum.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/pct2rgb.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_sieve.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/esri2wkt.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdalcompare.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/mkgraticule.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdalident.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdalmove.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/rgb2pct.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_merge.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal2xyz.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_auth.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_calc.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_edit.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/ogrmerge.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_pansharpen.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_polygonize.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gcps2vec.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/epsg_tr.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_retile.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal2tiles.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdal_fillnodata.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gcps2wld.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
copying build/scripts-3.6/gdalimport.py -> /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_proximity.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdalchksum.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/pct2rgb.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_sieve.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/esri2wkt.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdalcompare.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/mkgraticule.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdalident.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdalmove.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/rgb2pct.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_merge.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal2xyz.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_auth.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_calc.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_edit.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/ogrmerge.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_pansharpen.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_polygonize.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gcps2vec.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/epsg_tr.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_retile.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal2tiles.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdal_fillnodata.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gcps2wld.py to 755
changing mode of /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin/gdalimport.py to 755
for f in `ls ./scripts/*.py` ; do /bin/sh /tmp/pkgbuild/geography/py-gdal/work.alpha/gdal-3.0.4/libtool --mode=install --silent /tmp/pkgbuild/geography/py-gdal/work.alpha/gdal-3.0.4/install-sh -c $f /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/bin ; done
=> Automatic manual page handling
=> Generating post-install file lists
pkg_create: can't stat `/tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/gdalnumeric.py'
pkg_create: can't stat `/tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/__pycache__/gdalnumeric.cpython-36.pyc'
pkg_create: can't stat `/tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/_gdal_array.so'
=> Checking file-check results for py36-gdal-3.0.4nb4
ERROR: ************************************************************
ERROR: The following files are in the PLIST but not in /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg:
ERROR:         /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/__pycache__/gdalnumeric.cpython-36.pyc
ERROR:         /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/gdalnumeric.py
ERROR:         /tmp/pkgbuild/geography/py-gdal/work.alpha/.destdir/usr/pkg/lib/python3.6/site-packages/osgeo/_gdal_array.so
*** Error code 1

Stop.
make[1]: stopped in /usr/pkgsrc/geography/py-gdal
*** Error code 1

Stop.
make: stopped in /usr/pkgsrc/geography/py-gdal