=> Bootstrap dependency digest>=20010302: found digest-20190127 ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. ===> Building for openbabel-3.1.1nb1 Scanning dependencies of target coordgen [ 0%] Building CXX object external/coordgen-master/coordgen/CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o [ 1%] Building CXX object external/coordgen-master/coordgen/CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o Scanning dependencies of target maeparser [ 1%] Building CXX object external/maeparser-v1.2.3/maeparser/CMakeFiles/maeparser.dir/Buffer.cpp.o [ 2%] Building CXX object external/maeparser-v1.2.3/maeparser/CMakeFiles/maeparser.dir/MaeBlock.cpp.o [ 2%] Building CXX object external/coordgen-master/coordgen/CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o [ 2%] Building CXX object external/coordgen-master/coordgen/CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o [ 2%] Building CXX object external/coordgen-master/coordgen/CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o [ 2%] Building CXX object external/maeparser-v1.2.3/maeparser/CMakeFiles/maeparser.dir/MaeParser.cpp.o [ 2%] Building CXX object external/coordgen-master/coordgen/CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/boost/spirit/home/support/attributes.hpp:49, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/boost/spirit/home/qi/detail/attributes.hpp:12, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/boost/spirit/home/qi/auxiliary/lazy.hpp:17, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/boost/spirit/home/qi/detail/enable_lit.hpp:16, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/boost/spirit/home/qi/numeric/bool.hpp:16, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/boost/spirit/home/qi/numeric.hpp:14, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/boost/spirit/include/qi_numeric.hpp:16, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/external/maeparser-v1.2.3/maeparser/MaeParser.cpp:4: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void schrodinger::mae::IndexedValueCollector::parse(schrodinger::Buffer&) [with T = double]': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'schrodinger::mae::IndexedBlock* schrodinger::mae::IndexedBlockBuffer::getIndexedBlock()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); 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[with _Args = {const OpenBabel::vector3&}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 9%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.c.o In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/builder.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/builder.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBBuilder::LoadFragments()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'std::vector OpenBabel::OBBuilder::GetFragmentCoord(std::__cxx11::string)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 10%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr7.c.o /usr/include/g++/bits/stl_vector.h: In static member function 'static void OpenBabel::OBBuilder::ConnectFrags(OpenBabel::OBMol&, OpenBabel::OBMol&, std::vector, std::vector, std::vector)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/canon.cpp.o [ 10%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichisort.c.o [ 10%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichister.c.o [ 10%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichitaut.c.o [ 10%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_base26.c.o [ 10%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_dll.c.o [ 11%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll.c.o [ 11%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a.c.o [ 11%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a2.c.o [ 11%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_main.c.o [ 11%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/runichi.c.o [ 12%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/sha2.c.o [ 12%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/strutil.c.o [ 12%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/util.c.o [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/chains.cpp.o [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o [ 13%] Linking C shared library ../../../lib/libinchi.so [ 13%] Built target inchi [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/data.cpp.o [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/data_utilities.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/data_utilities.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/data_utilities.cpp:28: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/data_utilities.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/data_utilities.cpp:28: /usr/include/g++/bits/stl_vector.h: In function 'bool OpenBabel::extract_thermochemistry(OpenBabel::OBMol&, bool, int*, int, double, double*, double*, double*, double*, double*, double*, double*, double*, std::vector&, double*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.cpp.o [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/elements.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/data.h:28, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/data.cpp:25: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBAtomHOF&}; _Tp = OpenBabel::OBAtomHOF; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/data.h:28, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/data.cpp:25: /usr/include/g++/bits/stl_vector.h: In member function 'virtual void OpenBabel::OBAtomicHeatOfFormationTable::ParseLine(const char*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprint.cpp.o [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.cpp.o [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/format.cpp.o [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/generic.cpp.o [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/graphsym.cpp.o [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/grid.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/generic.cpp:25: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBAngle&}; _Tp = OpenBabel::OBAngle; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/generic.cpp:25: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBAngleData::SetData(OpenBabel::OBAngle&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/generic.cpp:25: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::triple&}; _Tp = OpenBabel::triple; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/generic.cpp:25: /usr/include/g++/bits/stl_vector.h: In member function 'bool OpenBabel::OBTorsion::AddTorsion(OpenBabel::quad&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In constructor 'OpenBabel::OBTorsion::OBTorsion(OpenBabel::OBAtom*, OpenBabel::OBAtom*, OpenBabel::OBAtom*, OpenBabel::OBAtom*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'bool OpenBabel::OBTorsion::AddTorsion(OpenBabel::OBAtom*, OpenBabel::OBAtom*, OpenBabel::OBAtom*, OpenBabel::OBAtom*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/generic.cpp:25: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBOrbital&}; _Tp = OpenBabel::OBOrbital; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'std::vector OpenBabel::OBUnitCell::GetCellVectors() const': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/forcefield.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefield.cpp:24: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFConstraint&}; _Tp = OpenBabel::OBFFConstraint; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/generic.cpp:25: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBOrbitalData::LoadClosedShellOrbitals(std::vector, std::vector >, unsigned int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/forcefield.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefield.cpp:24: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddTorsionConstraint(int, int, int, int, double)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddIgnore(int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomConstraint(int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomZConstraint(int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBOrbitalData::LoadBetaOrbitals(std::vector, std::vector >, unsigned int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomXConstraint(int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddDistanceConstraint(int, int, double)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomYConstraint(int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFFConstraints::AddAngleConstraint(int, int, int, double)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBOrbitalData::LoadAlphaOrbitals(std::vector, std::vector >, unsigned int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/griddata.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/forcefield.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefield.cpp:24: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/grid.cpp:22: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:458:5: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:458:5: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/grid.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBFloatGrid::Init(OpenBabel::OBMol&, double, double)': /usr/include/g++/bits/stl_vector.h:712:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/forcefield.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefield.cpp:24: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBForceField::WeightedRotorSearch(unsigned int, unsigned int, bool)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/forcefield.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefield.cpp:24: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'bool OpenBabel::OBForceField::GetCoordinates(OpenBabel::OBMol&)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.cpp.o [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/locale.cpp.o [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/matrix.cpp.o [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/mcdlutil.cpp.o [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/molchrg.cpp.o [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/mol.cpp.o [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/obconversion.cpp.o [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:22: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBMol&}; _Tp = OpenBabel::OBMol; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/obfunctions.cpp.o In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:24: /usr/include/g++/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'std::vector OpenBabel::OBMol::Separate(int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:24: /usr/include/g++/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/obiter.cpp.o In file included from /usr/include/g++/bits/stl_algo.h:61:0, from /usr/include/g++/algorithm:62, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:24: /usr/include/g++/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = long int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:24: /usr/include/g++/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBMol::PerceiveBondOrders()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:24: /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBMol::ConnectTheDots()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/mol.cpp:24: /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.cpp.o [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/op.cpp.o [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.cpp.o [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/patty.cpp.o [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.cpp.o [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.cpp.o [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.cpp.o [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/query.cpp.o [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/rand.cpp.o [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/reactionfacade.cpp.o [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/residue.cpp.o [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/ring.cpp.o [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.cpp.o [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/rotamer.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.cpp.o In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/rotamer.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBRotamerList::Setup(OpenBabel::OBMol&, OpenBabel::OBRotorList&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/rotor.cpp:22: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/rotor.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBRotor::RemoveSymTorsionValues(int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/tokenst.cpp.o [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/transform.cpp.o [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/typer.cpp.o [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.cpp.o [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/conformersearch.cpp.o [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/confsearch.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/obmolecformat.cpp:19: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBMol&}; _Tp = OpenBabel::OBMol; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/obmolecformat.cpp:19: /usr/include/g++/bits/stl_vector.h: In static member function 'static bool OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/distgeom.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/conformersearch.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual double OpenBabel::OBMinimizingRMSDConformerScore::Score(OpenBabel::OBMol&, unsigned int, const RotorKeys&, const std::vector&)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:27: /usr/include/g++/bits/stl_algo.h: In function '_ForwardIterator std::__remove_if(_ForwardIterator, _ForwardIterator, _Predicate) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred > >]': /usr/include/g++/bits/stl_algo.h:860:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __remove_if(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:860:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual double OpenBabel::OBRMSDConformerScore::Score(OpenBabel::OBMol&, unsigned int, const RotorKeys&, const std::vector&)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:27: /usr/include/g++/bits/stl_algo.h: In constructor 'OpenBabel::OBDiversePoses::OBDiversePoses(const OpenBabel::OBMol&, double, bool)': /usr/include/g++/bits/stl_algo.h:940:47: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __gnu_cxx::__ops::__pred_iter(__pred)); ^ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::ConformerScore}; _Tp = OpenBabel::ConformerScore; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::vector3&}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/stl_vector.h: In function 'std::vector OpenBabel::GetHeavyAtomCoords(const OpenBabel::OBMol*, const std::vector&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/map:60:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:46, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/conformersearch.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:20: /usr/include/g++/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple >&>, std::tuple<>}; _Key = std::vector; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'std::vector OpenBabel::OBDiversePoses::GetHeavyAtomCoords(const std::vector&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair >, double>&}; _Tp = std::pair, double>; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector, double> >::iterator {aka __gnu_cxx::__normal_iterator, double>*, std::vector, double> > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/map:61:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:46, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/conformersearch.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:20: /usr/include/g++/bits/stl_map.h: In member function 'virtual double OpenBabel::OBMinimizingEnergyConformerScore::Score(OpenBabel::OBMol&, unsigned int, const RotorKeys&, const std::vector&)': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >, double>}; _Tp = std::pair, double>; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector, double> >::iterator {aka __gnu_cxx::__normal_iterator, double>*, std::vector, double> > >}' changed in GCC 7.1 /usr/include/g++/bits/stl_map.h: In member function 'virtual double OpenBabel::OBEnergyConformerScore::Score(OpenBabel::OBMol&, unsigned int, const RotorKeys&, const std::vector&)': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:21: /usr/include/g++/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': /usr/include/g++/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'bool OpenBabel::OBDiversePoses::AddPose(std::vector, double)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': /usr/include/g++/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/g++/bits/stl_algo.h:61:0, from /usr/include/g++/algorithm:62, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:21: /usr/include/g++/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = long int; _Tp = OpenBabel::ConformerScore; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/g++/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:21: /usr/include/g++/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'bool OpenBabel::OBDiversePoses::AddPose(double*, double)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/bits/stl_algo.h:61:0, from /usr/include/g++/algorithm:62, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:21: /usr/include/g++/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = long int; _Tp = OpenBabel::ConformerScore; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/g++/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:27: /usr/include/g++/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, double>*, std::vector, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter, double>&, const std::pair, double>&)>]': /usr/include/g++/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, double>*, std::vector, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, double>&, const std::pair, double>&)>]': /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 In file included from /usr/include/g++/bits/stl_algo.h:61:0, from /usr/include/g++/algorithm:62, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:27: /usr/include/g++/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, double>*, std::vector, double> > >; _Distance = long int; _Tp = std::pair, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, double>&, const std::pair, double>&)>]': /usr/include/g++/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:21: /usr/include/g++/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:27: /usr/include/g++/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, double>*, std::vector, double> > >; _Size = long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, double>&, const std::pair, double>&)>]': /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/conformersearch.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'double OpenBabel::OBConformerSearch::MakeSelection()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:21: /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h: In function 'void OpenBabel::UpdateConformersFromTree(OpenBabel::OBMol*, std::vector&, OpenBabel::OBDiversePoses*, bool)': /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/atom.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/confsearch.cpp:22: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/conformersearch.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'int OpenBabel::OBConformerSearch::score_population()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/conformersearch.cpp:21: /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'int OpenBabel::OBForceField::DiverseConfGen(double, unsigned int, double, bool)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/depict/depict.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'virtual void OpenBabel::OBDepictPrivateBallAndStick::DrawWedge(OpenBabel::OBAtom*, OpenBabel::OBAtom*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual void OpenBabel::OBDepictPrivate::DrawWedge(OpenBabel::OBAtom*, OpenBabel::OBAtom*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/depict/depict.cpp:22: /usr/include/g++/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 In file included from /usr/include/g++/bits/stl_algo.h:61:0, from /usr/include/g++/algorithm:62, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/depict/depict.cpp:22: /usr/include/g++/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = long int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/depict/depict.cpp:22: /usr/include/g++/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)>]': /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/distgeom.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/distgeom.cpp:22: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::TetrahedralInfo&}; _Tp = OpenBabel::TetrahedralInfo; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/depict/depict.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'bool OpenBabel::OBDepict::DrawMolecule(OpenBabel::OBMol*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/ring.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/depict/depict.cpp:22: /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/distgeom.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/distgeom.cpp:22: /usr/include/g++/bits/stl_vector.h: In member function 'bool OpenBabel::OBDistanceGeometry::Setup(const OpenBabel::OBMol&, bool)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.cpp.o [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.cpp.o [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/math/align.cpp.o [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.cpp.o [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.cpp.o /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp: In function 'void OpenBabel::StereoRefToImplicit(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref)': /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:2973:16: warning: 'template class std::binder1st' is deprecated [-Wdeprecated-declarations] const std::binder1st > equal_to_atomId = std::bind1st (equal_to(), atomId); ^~~~~~~~~ In file included from /usr/include/g++/bits/stl_function.h:1127:0, from /usr/include/g++/bits/stl_tree.h:65, from /usr/include/g++/map:60, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~ /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp: In function 'void OpenBabel::ImplicitRefToStereo(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref, OpenBabel::OBStereo::Ref)': /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:3005:16: warning: 'template class std::binder1st' is deprecated [-Wdeprecated-declarations] const std::binder1st > equal_to_implicitRef = std::bind1st (equal_to(), (OBStereo::Ref) OBStereo::ImplicitRef); ^~~~~~~~~ In file included from /usr/include/g++/bits/stl_function.h:1127:0, from /usr/include/g++/bits/stl_tree.h:65, from /usr/include/g++/map:60, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/math/align.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::vector3&}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/math/align.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBAlign::SetTargetMol(const OpenBabel::OBMol&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::OBAlign::SetRefMol(const OpenBabel::OBMol&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/math/align.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'std::vector OpenBabel::OBAlign::GetAlignment()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/math/align.cpp:21: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/math/align.cpp:21: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::vector3&}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/bits/stl_vector.h: In function 'std::vector OpenBabel::CisTransFrom2D(OpenBabel::OBMol*, const OBStereoUnitSet&, const std::map*, bool)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/bits/stl_vector.h: In function 'std::vector OpenBabel::TetrahedralFrom3D(OpenBabel::OBMol*, const OBStereoUnitSet&, bool)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/base.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/stereo.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetranonplanar.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/stereo/tetrahedral.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/stereo/perception.cpp:26: /usr/include/g++/bits/vector.tcc: In function 'std::vector OpenBabel::CisTransFrom3D(OpenBabel::OBMol*, const OBStereoUnitSet&, bool)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 24%] Linking CXX shared library ../lib/libopenbabel.so [ 24%] Built target openbabel Scanning dependencies of target plugin_fingerprints Scanning dependencies of target plugin_descriptors [ 24%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o [ 24%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o Scanning dependencies of target plugin_ops [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/descriptors/groupcontrib.cpp:25: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'bool OpenBabel::OBGroupContrib::ParseFile()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o [ 26%] Linking CXX shared module ../lib/plugin_fingerprints.so [ 26%] Built target plugin_fingerprints Scanning dependencies of target plugin_forcefields [ 26%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o [ 27%] Linking CXX shared module ../lib/plugin_descriptors.so [ 27%] Built target plugin_descriptors Scanning dependencies of target plugin_charges [ 27%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/eem.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::EEMParameter&}; _Tp = OpenBabel::EEMParameter; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/eem.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::EEMCharges::_loadParameters()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFBondCalculationGaff&}; _Tp = OpenBabel::OBFFBondCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFAngleCalculationGaff&}; _Tp = OpenBabel::OBFFAngleCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFAngleCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFTorsionCalculationGaff&}; _Tp = OpenBabel::OBFFTorsionCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFTorsionCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFOOPCalculationGaff&}; _Tp = OpenBabel::OBFFOOPCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFOOPCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFVDWCalculationGaff&}; _Tp = OpenBabel::OBFFVDWCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFElectrostaticCalculationGaff&}; _Tp = OpenBabel::OBFFElectrostaticCalculationGaff; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::OBForceFieldGaff::SetupCalculations()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o [ 28%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o [ 29%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/op.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/fillUC.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::OpFillUC::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o [ 30%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFBondCalculationGhemical&}; _Tp = OpenBabel::OBFFBondCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFBondCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFAngleCalculationGhemical&}; _Tp = OpenBabel::OBFFAngleCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFAngleCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFTorsionCalculationGhemical&}; _Tp = OpenBabel::OBFFTorsionCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFTorsionCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFVDWCalculationGhemical&}; _Tp = OpenBabel::OBFFVDWCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFElectrostaticCalculationGhemical&}; _Tp = OpenBabel::OBFFElectrostaticCalculationGhemical; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/map:60:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/fromfile.cpp:21: /usr/include/g++/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::OBForceFieldGhemical::SetupCalculations()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/map:61:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:27, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/fromfile.cpp:21: /usr/include/g++/bits/stl_map.h: In member function 'virtual bool OpenBabel::FromFileCharges::ComputeCharges(OpenBabel::OBMol&, const char*)': /usr/include/g++/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ [ 30%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldmmff94.cpp:31: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFBondCalculationMMFF94&}; _Tp = OpenBabel::OBFFBondCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFAngleCalculationMMFF94&}; _Tp = OpenBabel::OBFFAngleCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFStrBndCalculationMMFF94&}; _Tp = OpenBabel::OBFFStrBndCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFTorsionCalculationMMFF94&}; _Tp = OpenBabel::OBFFTorsionCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFOOPCalculationMMFF94&}; _Tp = OpenBabel::OBFFOOPCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldmmff94.cpp:31: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFOOPCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldmmff94.cpp:31: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFVDWCalculationMMFF94&}; _Tp = OpenBabel::OBFFVDWCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFElectrostaticCalculationMMFF94&}; _Tp = OpenBabel::OBFFElectrostaticCalculationMMFF94; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefieldmmff94.cpp:31: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::OBForceFieldMMFF94::SetupCalculations()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o [ 31%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefielduff.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFBondCalculationUFF&}; _Tp = OpenBabel::OBFFBondCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFVDWCalculationUFF&}; _Tp = OpenBabel::OBFFVDWCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefielduff.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFVDWCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefielduff.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFAngleCalculationUFF&}; _Tp = OpenBabel::OBFFAngleCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFTorsionCalculationUFF&}; _Tp = OpenBabel::OBFFTorsionCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFOOPCalculationUFF&}; _Tp = OpenBabel::OBFFOOPCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/op.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/sort.cpp:19: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefielduff.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBFFOOPCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/deferred.h:5, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/sort.cpp:24: /usr/include/g++/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/g++/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::OBForceFieldUFF::SetupCalculations()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/bits/stl_algo.h:61:0, from /usr/include/g++/algorithm:62, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/deferred.h:5, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/sort.cpp:24: /usr/include/g++/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = long int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/g++/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/deferred.h:5, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/sort.cpp:24: /usr/include/g++/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefielduff.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBFFElectrostaticCalculationUFF&}; _Tp = OpenBabel::OBFFElectrostaticCalculationUFF; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/forcefields/forcefielduff.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'bool OpenBabel::OBForceFieldUFF::SetupElectrostatics()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/op.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/sort.cpp:19: /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::OpSort::ProcessVec(std::vector&)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/deferred.h:5, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/sort.cpp:24: /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/g++/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 32%] Linking CXX shared module ../lib/plugin_forcefields.so [ 32%] Built target plugin_forcefields [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o Scanning dependencies of target chemdoodlejsonformat [ 32%] Building CXX object src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Eigen::Matrix&}; _Tp = Eigen::Matrix; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::QEqCharges::ParseParamFile()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 [ 33%] Linking CXX shared module ../../lib/chemdoodlejsonformat.so [ 33%] Built target chemdoodlejsonformat Scanning dependencies of target cmlreactformat [ 33%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o [ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::QEqCharges::ComputeCharges(OpenBabel::OBMol&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qeq.cpp:21: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o [ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o [ 34%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/op.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/opalign.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::vector3&}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/op.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/ops/opalign.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::OpAlign::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o [ 34%] Linking CXX shared module ../../lib/cmlreactformat.so [ 34%] Built target cmlreactformat Scanning dependencies of target xmlformat [ 34%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o [ 34%] Linking CXX shared module ../lib/plugin_ops.so [ 34%] Built target plugin_ops Scanning dependencies of target cmlformat [ 35%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o [ 35%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o [ 35%] Linking CXX shared module ../../lib/xmlformat.so [ 35%] Built target xmlformat Scanning dependencies of target cdxmlformat [ 35%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o [ 36%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o [ 36%] Linking CXX shared module ../../lib/cdxmlformat.so [ 36%] Built target cdxmlformat Scanning dependencies of target png2format [ 36%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Eigen::Matrix&}; _Tp = Eigen::Matrix; _Alloc = std::allocator >]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::QTPIECharges::ParseParamFile()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.cpp:21: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 [ 36%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o [ 36%] Linking CXX shared module ../../lib/cmlformat.so [ 36%] Built target cmlformat [ 36%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o Scanning dependencies of target chemdrawcdx [ 36%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.cpp:21: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::QTPIECharges::ComputeCharges(OpenBabel::OBMol&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/dlhandler.h:25, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/plugin.h:23, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/chargemodel.h:24, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.h:22, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/charges/qtpie.cpp:21: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Linking CXX shared module ../../lib/png2format.so [ 37%] Linking CXX shared module ../lib/plugin_charges.so [ 37%] Built target png2format Scanning dependencies of target rxnformat [ 38%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o [ 38%] Built target plugin_charges Scanning dependencies of target yasaraformat [ 38%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o [ 38%] Linking CXX shared module ../../lib/yasaraformat.so [ 38%] Built target yasaraformat Scanning dependencies of target wlnformat [ 38%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o [ 38%] Linking CXX shared module ../../lib/rxnformat.so [ 38%] Built target rxnformat Scanning dependencies of target unichemformat [ 38%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o [ 38%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o [ 38%] Linking CXX shared module ../../lib/chemdrawcdx.so [ 38%] Linking CXX shared module ../../lib/unichemformat.so [ 38%] Built target chemdrawcdx Scanning dependencies of target thermoformat [ 38%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o [ 38%] Built target unichemformat Scanning dependencies of target pqrformat [ 38%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.cpp.o [ 38%] Linking CXX shared module ../../lib/thermoformat.so [ 38%] Built target thermoformat Scanning dependencies of target pointcloudformat [ 38%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o [ 38%] Linking CXX shared module ../../lib/wlnformat.so [ 38%] Linking CXX shared module ../../lib/pqrformat.so [ 38%] Built target wlnformat Scanning dependencies of target pdbqtformat [ 38%] Built target pqrformat [ 38%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o Scanning dependencies of target pcmodelformat [ 38%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/pointcloudformat.cpp:28: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::vector3&}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/pointcloudformat.cpp:28: /usr/include/g++/bits/stl_vector.h: In function 'bool OpenBabel::conditional_add(std::vector&, OpenBabel::vector3, double)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/pointcloudformat.cpp:28: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/pointcloudformat.cpp:28: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::PointCloudFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 38%] Linking CXX shared module ../../lib/pointcloudformat.so [ 38%] Built target pointcloudformat Scanning dependencies of target outformat [ 38%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.cpp.o [ 38%] Linking CXX shared module ../../lib/pcmodelformat.so [ 38%] Built target pcmodelformat Scanning dependencies of target msmsformat [ 38%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o [ 38%] Linking CXX shared module ../../lib/outformat.so [ 38%] Built target outformat Scanning dependencies of target moldenformat [ 38%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/pdbqtformat.cpp:24: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBMol&}; _Tp = OpenBabel::OBMol; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX shared module ../../lib/msmsformat.so [ 38%] Built target msmsformat Scanning dependencies of target mmcifformat [ 38%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/moldenformat.cpp:29: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::vector3&}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/pdbqtformat.cpp:24: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::PDBQTFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/moldenformat.cpp:29: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::OBMoldenFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/moldenformat.cpp:29: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Linking CXX shared module ../../lib/moldenformat.so [ 40%] Linking CXX shared module ../../lib/pdbqtformat.so [ 40%] Built target moldenformat [ 40%] Built target pdbqtformat Scanning dependencies of target msiformat Scanning dependencies of target lmpdatformat [ 41%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o [ 41%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o In file included from /usr/include/g++/map:60:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/lmpdatformat.cpp:15: /usr/include/g++/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/map:61:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/lmpdatformat.cpp:15: /usr/include/g++/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = double; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ [ 41%] Linking CXX shared module ../../lib/msiformat.so [ 41%] Linking CXX shared module ../../lib/mmcifformat.so [ 41%] Built target msiformat Scanning dependencies of target mmodformat [ 42%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o /usr/include/g++/bits/stl_map.h: In member function 'virtual bool OpenBabel::LMPDATFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ [ 42%] Built target mmcifformat Scanning dependencies of target groformat [ 42%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.cpp.o [ 43%] Linking CXX shared module ../../lib/lmpdatformat.so [ 43%] Built target lmpdatformat Scanning dependencies of target gromos96format [ 43%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o [ 43%] Linking CXX shared module ../../lib/mmodformat.so [ 43%] Built target mmodformat Scanning dependencies of target molproformat [ 43%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o [ 43%] Linking CXX shared module ../../lib/gromos96format.so [ 43%] Built target gromos96format Scanning dependencies of target stlformat [ 43%] Building CXX object src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o [ 44%] Linking CXX shared module ../../lib/groformat.so [ 44%] Built target groformat Scanning dependencies of target jaguarformat [ 44%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/stlformat.cpp:28: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::Triangle}; _Tp = OpenBabel::Triangle; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In function 'void OpenBabel::map_sphere(std::vector&, OpenBabel::vector3, double, uint16_t)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 45%] Linking CXX shared module ../../lib/stlformat.so In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/molproformat.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 [ 45%] Built target stlformat Scanning dependencies of target alchemyformat [ 45%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::MolproOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/molproformat.cpp:20: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 45%] Linking CXX shared module ../../lib/molproformat.so [ 45%] Built target molproformat Scanning dependencies of target gausszmatformat [ 45%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o [ 45%] Linking CXX shared module ../../lib/jaguarformat.so [ 45%] Built target jaguarformat Scanning dependencies of target gamessformat [ 45%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o [ 45%] Linking CXX shared module ../../lib/alchemyformat.so [ 45%] Built target alchemyformat Scanning dependencies of target daltonformat [ 46%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o In file included from /usr/include/g++/map:60:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gausszmatformat.cpp:16: /usr/include/g++/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_tree.h:2130:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib/gausszmatformat.so [ 46%] Built target gausszmatformat Scanning dependencies of target hinformat [ 47%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.cpp.o [ 47%] Linking CXX shared module ../../lib/daltonformat.so [ 47%] Built target daltonformat Scanning dependencies of target balstformat [ 48%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gamessformat.cpp:19: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 [ 48%] Linking CXX shared module ../../lib/hinformat.so In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gamessformat.cpp:19: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::GAMESSOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 48%] Linking CXX shared module ../../lib/balstformat.so /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gamessformat.cpp:19: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 48%] Built target hinformat Scanning dependencies of target chemtoolformat [ 48%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o [ 48%] Built target balstformat Scanning dependencies of target opendxformat [ 48%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o [ 48%] Linking CXX shared module ../../lib/chemtoolformat.so [ 48%] Built target chemtoolformat Scanning dependencies of target adfformat [ 49%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o [ 49%] Linking CXX shared module ../../lib/gamessformat.so In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/opendxformat.cpp:24: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 49%] Built target gamessformat /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::OBOpenDXCubeFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Scanning dependencies of target pngformat [ 49%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o [ 49%] Linking CXX shared module ../../lib/opendxformat.so [ 49%] Built target opendxformat Scanning dependencies of target fhiaimsformat [ 49%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o [ 49%] Linking CXX shared module ../../lib/pngformat.so [ 49%] Built target pngformat Scanning dependencies of target boxformat [ 49%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/fhiaimsformat.cpp:15: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::FHIaimsFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Linking CXX shared module ../../lib/fhiaimsformat.so [ 49%] Built target fhiaimsformat In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/adfformat.cpp:31: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ Scanning dependencies of target cssrformat [ 49%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::ADFDftbFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::ADFBandFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::OBT41Format::AtomData}; _Tp = OpenBabel::OBT41Format::AtomData; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'bool OpenBabel::OBT41Format::ReadASCII(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Linking CXX shared module ../../lib/adfformat.so [ 49%] Linking CXX shared module ../../lib/boxformat.so [ 49%] Built target adfformat Scanning dependencies of target viewmolformat [ 49%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o [ 49%] Built target boxformat Scanning dependencies of target abinitformat [ 49%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o [ 49%] Linking CXX shared module ../../lib/cssrformat.so [ 49%] Built target cssrformat Scanning dependencies of target gamessukformat [ 50%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o [ 51%] Linking CXX shared module ../../lib/viewmolformat.so [ 51%] Built target viewmolformat Scanning dependencies of target posformat [ 52%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/abinitformat.cpp:16: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 53%] Linking CXX shared module ../../lib/abinitformat.so [ 53%] Built target abinitformat Scanning dependencies of target lpmdformat [ 53%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o [ 53%] Linking CXX shared module ../../lib/posformat.so [ 53%] Built target posformat Scanning dependencies of target aoforceformat [ 54%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gamessukformat.cpp:14: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadNormalModesHessian(OpenBabel::OBMol&, std::istream&)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/lpmdformat.cpp:15: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadNormalModesForce(OpenBabel::OBMol&, std::istream&)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::LpmdFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/map:60:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gamessukformat.cpp:14: /usr/include/g++/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/map:61:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gamessukformat.cpp:14: /usr/include/g++/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = double; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h: In member function 'bool OpenBabel::GAMESSUKFormat::ReadVariables(std::istream&, double, std::__cxx11::string)': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h: In member function 'bool OpenBabel::GAMESSUKFormat::ReadLineCartesian(OpenBabel::OBAtom*, std::vector >&, double)': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/aoforceformat.cpp:17: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 54%] Linking CXX shared module ../../lib/gamessukformat.so /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::AoforceFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 54%] Built target gamessukformat Scanning dependencies of target confabreport [ 54%] Building CXX object src/formats/CMakeFiles/confabreport.dir/confabreport.cpp.o [ 54%] Linking CXX shared module ../../lib/aoforceformat.so [ 54%] Built target aoforceformat Scanning dependencies of target dmolformat [ 54%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o [ 54%] Linking CXX shared module ../../lib/lpmdformat.so [ 54%] Built target lpmdformat Scanning dependencies of target pdbformat [ 54%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o In file included from /usr/include/g++/bits/stl_algo.h:61:0, from /usr/include/g++/algorithm:62, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/confabreport.cpp:35: /usr/include/g++/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = long int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/g++/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/g++/algorithm:62:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.buildlink/include/eigen3/Eigen/Core:288, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/math/align.h:26, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/confabreport.cpp:35: /usr/include/g++/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/g++/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_algo.h: In member function 'void OpenBabel::ConfabReport::WriteOutput(std::ostream&)': /usr/include/g++/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ [ 54%] Linking CXX shared module ../../lib/dmolformat.so [ 54%] Built target dmolformat Scanning dependencies of target acesformat [ 54%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o [ 54%] Linking CXX shared module ../../lib/confabreport.so [ 54%] Built target confabreport Scanning dependencies of target mol2format [ 54%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/acesformat.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::AcesOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 54%] Linking CXX shared module ../../lib/acesformat.so [ 54%] Built target acesformat Scanning dependencies of target nulformat [ 54%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o [ 54%] Linking CXX shared module ../../lib/pdbformat.so [ 54%] Built target pdbformat Scanning dependencies of target mdlformat [ 54%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o [ 54%] Linking CXX shared module ../../lib/mol2format.so [ 54%] Built target mol2format [ 54%] Linking CXX shared module ../../lib/nulformat.so Scanning dependencies of target pubchemjsonformat [ 54%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o [ 54%] Built target nulformat Scanning dependencies of target dlpolyformat [ 54%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/dlpolyformat.cpp:14: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'bool OpenBabel::DlpolyInputReader::ReadAtom(std::istream&, OpenBabel::OBMol&)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 54%] Linking CXX shared module ../../lib/dlpolyformat.so [ 54%] Built target dlpolyformat Scanning dependencies of target titleformat [ 54%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o [ 54%] Linking CXX shared module ../../lib/titleformat.so [ 54%] Built target titleformat Scanning dependencies of target textformat [ 54%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.cpp.o [ 54%] Linking CXX shared module ../../lib/mdlformat.so [ 54%] Built target mdlformat [ 54%] Linking CXX shared module ../../lib/pubchemjsonformat.so Scanning dependencies of target cacaoformat [ 55%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o [ 55%] Linking CXX shared module ../../lib/textformat.so [ 55%] Built target pubchemjsonformat Scanning dependencies of target copyformat [ 55%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o [ 55%] Built target textformat Scanning dependencies of target gausscubeformat [ 55%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o [ 55%] Linking CXX shared module ../../lib/copyformat.so [ 55%] Built target copyformat Scanning dependencies of target mpqcformat [ 55%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o [ 55%] Linking CXX shared module ../../lib/cacaoformat.so [ 55%] Built target cacaoformat Scanning dependencies of target mdffformat [ 56%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o [ 56%] Linking CXX shared module ../../lib/mpqcformat.so [ 56%] Built target mpqcformat Scanning dependencies of target freefracformat [ 56%] Building CXX object src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o [ 56%] Linking CXX shared module ../../lib/gausscubeformat.so [ 56%] Built target gausscubeformat Scanning dependencies of target smileyformat [ 56%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o [ 56%] Linking CXX shared module ../../lib/freefracformat.so [ 56%] Built target freefracformat Scanning dependencies of target MNAformat [ 56%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o In file included from /usr/include/g++/map:60:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/mdffformat.cpp:17: /usr/include/g++/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/map:61:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/mdffformat.cpp:17: /usr/include/g++/bits/stl_map.h: In member function 'virtual bool OpenBabel::MDFFFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ [ 56%] Linking CXX shared module ../../lib/mdffformat.so [ 56%] Built target mdffformat Scanning dependencies of target painterformat [ 56%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o [ 56%] Linking CXX shared module ../../lib/MNAformat.so [ 56%] Built target MNAformat Scanning dependencies of target molreport [ 56%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.cpp.o [ 56%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o [ 57%] Linking CXX shared module ../../lib/painterformat.so [ 57%] Linking CXX shared module ../../lib/smileyformat.so [ 57%] Built target painterformat [ 57%] Built target smileyformat Scanning dependencies of target xyzformat [ 58%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o Scanning dependencies of target crystal09format [ 58%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o [ 58%] Linking CXX shared module ../../lib/molreport.so [ 58%] Built target molreport Scanning dependencies of target PQSformat [ 58%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.cpp.o [ 58%] Linking CXX shared module ../../lib/xyzformat.so In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/crystal09format.cpp:18: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 [ 58%] Built target xyzformat [ 58%] Linking CXX shared module ../../lib/PQSformat.so Scanning dependencies of target mpdformat [ 58%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/crystal09format.cpp:18: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::Crystal09Format::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/crystal09format.cpp:18: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 58%] Built target PQSformat Scanning dependencies of target svgformat [ 58%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o [ 58%] Linking CXX shared module ../../lib/crystal09format.so [ 58%] Built target crystal09format Scanning dependencies of target povrayformat [ 58%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o [ 58%] Linking CXX shared module ../../lib/mpdformat.so [ 58%] Built target mpdformat Scanning dependencies of target inchiformat [ 58%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o [ 58%] Linking CXX shared module ../../lib/svgformat.so [ 58%] Built target svgformat Scanning dependencies of target reportformat [ 58%] Building CXX object src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o [ 58%] Linking CXX shared module ../../lib/povrayformat.so [ 58%] Built target povrayformat Scanning dependencies of target mopacformat [ 58%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o [ 58%] Linking CXX shared module ../../lib/reportformat.so [ 58%] Built target reportformat Scanning dependencies of target pubchem [ 59%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o [ 59%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o [ 60%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o [ 60%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/mopacformat.cpp:17: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::MOPACFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Linking CXX shared module ../../lib/inchiformat.so [ 60%] Linking CXX shared module ../../lib/pubchem.so [ 61%] Linking CXX shared module ../../lib/mopacformat.so [ 61%] Built target inchiformat Scanning dependencies of target shelxformat [ 61%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.cpp.o [ 61%] Built target pubchem [ 61%] Built target mopacformat Scanning dependencies of target pwscfformat Scanning dependencies of target cccformat [ 61%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o [ 61%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.cpp.o [ 61%] Linking CXX shared module ../../lib/cccformat.so [ 61%] Built target cccformat Scanning dependencies of target qchemformat [ 61%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o [ 61%] Linking CXX shared module ../../lib/shelxformat.so [ 61%] Built target shelxformat Scanning dependencies of target siestaformat [ 61%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o [ 62%] Linking CXX shared module ../../lib/pwscfformat.so [ 62%] Built target pwscfformat Scanning dependencies of target fchkformat [ 62%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/qchemformat.cpp:18: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::QChemOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Linking CXX shared module ../../lib/qchemformat.so [ 62%] Built target qchemformat Scanning dependencies of target xsfformat [ 62%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/fchkformat.cpp:23: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/fchkformat.cpp:23: /usr/include/g++/bits/stl_vector.h: In static member function 'static bool OpenBabel::FCHKFormat::read_numbers(const char*, std::vector<_Tp>&, unsigned int) [with T = double]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 63%] Linking CXX shared module ../../lib/siestaformat.so [ 63%] Built target siestaformat Scanning dependencies of target carformat [ 63%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.cpp.o /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::FCHKFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/xsfformat.cpp:16: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::XSFFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 63%] Linking CXX shared module ../../lib/xsfformat.so [ 63%] Built target xsfformat Scanning dependencies of target tinkerformat [ 64%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o [ 64%] Linking CXX shared module ../../lib/fchkformat.so [ 64%] Built target fchkformat Scanning dependencies of target asciiformat [ 64%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o [ 65%] Linking CXX shared module ../../lib/carformat.so [ 65%] Built target carformat Scanning dependencies of target turbomoleformat [ 65%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o [ 65%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o [ 65%] Linking CXX shared module ../../lib/tinkerformat.so [ 66%] Linking CXX shared module ../../lib/turbomoleformat.so [ 66%] Built target tinkerformat [ 66%] Built target turbomoleformat Scanning dependencies of target acrformat Scanning dependencies of target rsmiformat [ 66%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.cpp.o [ 66%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o [ 66%] Linking CXX shared module ../../lib/asciiformat.so [ 66%] Built target asciiformat Scanning dependencies of target rinchiformat [ 67%] Building CXX object src/formats/CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o [ 67%] Linking CXX shared module ../../lib/acrformat.so [ 67%] Built target acrformat Scanning dependencies of target gaussformat [ 67%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o [ 67%] Linking CXX shared module ../../lib/rsmiformat.so [ 67%] Built target rsmiformat Scanning dependencies of target vaspformat [ 67%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o [ 67%] Linking CXX shared module ../../lib/rinchiformat.so [ 67%] Built target rinchiformat Scanning dependencies of target MCDLformat [ 67%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/data.h:28, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gaussformat.cpp:17: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/vaspformat.cpp:16: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::matrix3x3&}; _Tp = OpenBabel::matrix3x3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/data.h:28, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/gaussformat.cpp:17: /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::GaussianOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::VASPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/vaspformat.cpp:16: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 68%] Linking CXX shared module ../../lib/gaussformat.so [ 68%] Built target gaussformat Scanning dependencies of target nwchemformat [ 69%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o [ 69%] Linking CXX shared module ../../lib/vaspformat.so [ 69%] Built target vaspformat Scanning dependencies of target maeformat [ 69%] Building CXX object src/formats/CMakeFiles/maeformat.dir/maeformat.cpp.o [ 70%] Linking CXX shared module ../../lib/MCDLformat.so [ 70%] Built target MCDLformat Scanning dependencies of target zindoformat [ 70%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.cpp.o [ 71%] Linking CXX shared module ../../lib/zindoformat.so [ 71%] Built target zindoformat Scanning dependencies of target orcaformat [ 71%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBOrbital&}; _Tp = OpenBabel::OBOrbital; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::NWChemOutputFormat::ReadOrbitals(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::NWChemOutputFormat::ReadZTSCalculation(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void OpenBabel::NWChemOutputFormat::ReadPartialCharges(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void OpenBabel::NWChemOutputFormat::ReadMEPCalculation(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void OpenBabel::NWChemOutputFormat::ReadTDDFTCalculation(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:630:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::NWChemOutputFormat::ReadGeometryOptimizationCalculation(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/stl_vector.h:1411:19: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 _M_range_insert(__pos, __first, __last, ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ std::__iterator_category(__first)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:1411:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void OpenBabel::NWChemOutputFormat::ReadFrequencyCalculation(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/nwchemformat.cpp:17: /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void OpenBabel::NWChemOutputFormat::ReadNEBCalculation(std::istream*, OpenBabel::OBMol*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Linking CXX shared module ../../lib/nwchemformat.so [ 71%] Built target nwchemformat Scanning dependencies of target chemkinformat [ 71%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/orcaformat.cpp:18: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBOrbital&}; _Tp = OpenBabel::OBOrbital; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 /usr/include/g++/bits/vector.tcc: In member function 'virtual bool OpenBabel::OrcaOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:30, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/orcaformat.cpp:18: /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 71%] Linking CXX shared module ../../lib/maeformat.so [ 71%] Built target maeformat Scanning dependencies of target cifformat [ 71%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o [ 72%] Linking CXX shared module ../../lib/orcaformat.so [ 72%] Built target orcaformat Scanning dependencies of target APIInterface [ 72%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o [ 72%] Linking CXX shared module ../../lib/APIInterface.so [ 72%] Built target APIInterface Scanning dependencies of target fhformat [ 72%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o [ 73%] Linking CXX shared module ../../lib/fhformat.so [ 74%] Linking CXX shared module ../../lib/chemkinformat.so [ 74%] Built target fhformat Scanning dependencies of target gulpformat [ 74%] Built target chemkinformat [ 74%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o Scanning dependencies of target CSRformat [ 74%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.cpp.o In file included from /usr/include/g++/map:60:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/cifformat.cpp:24: /usr/include/g++/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/g++/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/map:61:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obconversion.h:31, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/obmolecformat.h:36, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/cifformat.cpp:24: /usr/include/g++/bits/stl_map.h: In member function 'void OpenBabel::CIFData::ExtractCharges()': /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ /usr/include/g++/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}' changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, ^~~ [ 74%] Linking CXX shared module ../../lib/CSRformat.so [ 74%] Built target CSRformat Scanning dependencies of target cofformat [ 75%] Building CXX object src/formats/CMakeFiles/cofformat.dir/cofformat.cpp.o [ 75%] Linking CXX shared module ../../lib/gulpformat.so [ 75%] Built target gulpformat Scanning dependencies of target amberformat [ 75%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.cpp.o [ 75%] Linking CXX shared module ../../lib/cifformat.so [ 75%] Built target cifformat Scanning dependencies of target chem3dformat [ 75%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o [ 75%] Linking CXX shared module ../../lib/amberformat.so [ 75%] Built target amberformat Scanning dependencies of target castepformat [ 75%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o [ 75%] Linking CXX shared module ../../lib/chem3dformat.so [ 75%] Built target chem3dformat [ 75%] Linking CXX shared module ../../lib/cofformat.so Scanning dependencies of target chemdrawct [ 75%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o [ 75%] Built target cofformat Scanning dependencies of target ghemicalformat [ 75%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o [ 75%] Linking CXX shared module ../../lib/chemdrawct.so [ 75%] Built target chemdrawct [ 75%] Linking CXX shared module ../../lib/castepformat.so Scanning dependencies of target fingerprintformat [ 75%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o [ 75%] Built target castepformat Scanning dependencies of target bgfformat [ 75%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.cpp.o [ 75%] Linking CXX shared module ../../lib/ghemicalformat.so [ 75%] Built target ghemicalformat Scanning dependencies of target crkformat [ 75%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o [ 75%] Linking CXX shared module ../../lib/fingerprintformat.so [ 75%] Built target fingerprintformat Scanning 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Linking CXX shared module ../../lib/exyzformat.so [ 78%] Built target exyzformat Scanning dependencies of target fastaformat [ 78%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/fastsearchformat.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBMol&}; _Tp = OpenBabel::OBMol; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/src/formats/fastsearchformat.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'void OpenBabel::FastSearchFormat::AddPattern(std::vector&, OpenBabel::OBMol, int)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'bool OpenBabel::FastSearchFormat::ObtainTarget(OpenBabel::OBConversion*, std::vector&, const string&)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'virtual bool OpenBabel::FastSearchFormat::ReadChemObject(OpenBabel::OBConversion*)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 79%] Linking CXX shared module ../../lib/fastsearchformat.so [ 79%] Built target fastsearchformat Scanning dependencies of target featformat [ 79%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.cpp.o [ 79%] Linking CXX shared module ../../lib/fastaformat.so [ 79%] Built target fastaformat Scanning dependencies of target fpsformat [ 80%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o [ 80%] Linking CXX shared module ../../lib/featformat.so [ 80%] Built target featformat Scanning dependencies of target obrms [ 80%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.cpp.o [ 80%] Linking CXX shared module ../../lib/fpsformat.so [ 80%] Built target fpsformat Scanning dependencies of target obspectrophore [ 80%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/tools/obrms.cpp:31: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const OpenBabel::OBMol&}; _Tp = OpenBabel::OBMol; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/tools/obrms.cpp:31: /usr/include/g++/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenBabel::OBMol; _Alloc = std::allocator]': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 81%] Linking CXX executable ../bin/obrms [ 81%] Built target obrms 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Linking CXX executable ../bin/obmm Scanning dependencies of target obdistgen [ 87%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.cpp.o [ 87%] Built target obmm Scanning dependencies of target test_inchiwrite [ 87%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o [ 87%] Linking CXX executable ../bin/obsym [ 87%] Built target obsym [ 87%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o Scanning dependencies of target test_runner [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.cpp.o [ 88%] Linking CXX executable ../bin/test_inchiwrite [ 88%] Linking CXX executable ../bin/obdistgen [ 88%] Built target test_inchiwrite Scanning dependencies of target roundtrip [ 88%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o [ 88%] Built target obdistgen [ 88%] Linking CXX executable ../bin/roundtrip [ 88%] Built target roundtrip [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/aliastest.cpp.o [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/obtest.h:7, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/aligntest.cpp:1: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {OpenBabel::vector3}; _Tp = OpenBabel::vector3; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In function 'void test_bug()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In function 'void test_simpleAlign()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In function 'void test_QCP()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.cpp.o [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.cpp.o [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/conversiontest.cpp.o [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.cpp.o [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.cpp.o [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/periodictest.cpp.o [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/obtest.h:7, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/periodictest.cpp:20: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/g++/vector:64:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/obtest.h:7, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/periodictest.cpp:20: /usr/include/g++/bits/stl_vector.h: In member function 'void PeriodicTester::TestLengths(double, double, double)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In member function 'void PeriodicTester::TestAngles(double, double)': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h: In function 'void testNonperiodicNegative()': /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/g++/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/g++/vector:69:0, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/include/openbabel/mol.h:44, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/obtest.h:7, from /tmp/pkgbuild/biology/openbabel/work.earmv6hf/openbabel-openbabel-3-1-1/test/rotortest.cpp:1: /usr/include/g++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/g++/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector::iterator {aka __gnu_cxx::__normal_iterator >}' changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.cpp.o /usr/include/g++/bits/vector.tcc: In function 'void testOBRotorGetSet()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc: In function 'void testOBRotorSetRotor()': /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/g++/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.cpp.o [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.cpp.o [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.cpp.o [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/maereadertest.cpp.o [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.cpp.o [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.cpp.o [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.cpp.o [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.cpp.o [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.cpp.o [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.cpp.o [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/format.cpp.o [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/residue.cpp.o [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.cpp.o [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.cpp.o [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.cpp.o [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/cmlreadfile.cpp.o [100%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.cpp.o [100%] Linking CXX executable ../bin/test_runner [100%] Built target test_runner