=> Bootstrap dependency digest>=20010302: found digest-20190127
===> Skipping vulnerability checks.
WARNING: No /var/db/pkg/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'.
===> Installing for openbabel-3.1.1nb1
=> Generating pre-install file lists
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Install the project...
-- Install configuration: "Release"
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/include/openbabel3/openbabel/babelconfig.h
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/pkgconfig/openbabel-3.pc
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-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/cmake/openbabel3/OpenBabel3Config.cmake
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-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/smileyformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/stlformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/thermoformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/tinkerformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/unichemformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/viewmolformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/wlnformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/xedformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/xyzformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/yasaraformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/rxnformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/chemdrawcdx.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/chemkinformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/rinchiformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/rsmiformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/png2format.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/cdxmlformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/cmlformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/pubchem.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/xmlformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/cmlreactformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/chemdoodlejsonformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/openbabel/3.1.0/pubchemjsonformat.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/libinchi.so.0.4.1
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/libinchi.so.0
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/libinchi.so
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obabel
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obconformer
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obenergy
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obfit
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obfitall
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obgen
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obminimize
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obmm
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obprobe
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obprop
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obrotamer
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obrotate
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obsym
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obtautomer
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obthermo
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obdistgen
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obgrep
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obspectrophore
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/obrms
-- Installing: /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/bin/roundtrip
=> Automatic manual page handling
=> Generating post-install file lists
pkg_create: can't stat `/tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/libcoordgen.so.1.4.1'
=> Checking file-check results for openbabel-3.1.1nb1
ERROR: ************************************************************
ERROR: The following files are in the PLIST but not in /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg:
ERROR:         /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/libcoordgen.so.1.4.1
ERROR: ************************************************************
ERROR: The following files are in /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg but not in the PLIST:
ERROR:         /tmp/pkgbuild/biology/openbabel/work.earmv6hf/.destdir/usr/pkg/lib/libcoordgen.so.1.4.2
*** Error code 1

Stop.
make[1]: stopped in /usr/pkgsrc/biology/openbabel
*** Error code 1

Stop.
make: stopped in /usr/pkgsrc/biology/openbabel