=> Bootstrap dependency digest>=20010302: found digest-20190127 => Checksum SHA1 OK for gromacs-4.5.5.tar.gz => Checksum RMD160 OK for gromacs-4.5.5.tar.gz => Checksum SHA512 OK for gromacs-4.5.5.tar.gz ===> Installing dependencies for gromacs-4.5.5nb11 ========================================================================== The supported build options for gromacs are: mpi x11 The currently selected options are: mpi x11 You can select which build options to use by setting PKG_DEFAULT_OPTIONS or the following variable. Its current value is shown: PKG_OPTIONS.gromacs (not defined) ========================================================================== => Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.6nb2 => Tool dependency pkgconf-[0-9]*: found pkgconf-1.7.3 => Build dependency x11-links>=1.32: found x11-links-1.32 => Build dependency cwrappers>=20150314: found cwrappers-20180325 => Full dependency perl>=5.0: found perl-5.32.0nb1 => Full dependency mpich>=3: found mpich-3.2.1nb4 => Full dependency fftw>=3.1nb1: found fftw-3.3.8nb3 => Full dependency gsl>=1.5nb1: found gsl-2.5 => Full dependency libxml2>=2.9.10nb3: found libxml2-2.9.10nb3 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Overriding tools for gromacs-4.5.5nb11 ===> Extracting for gromacs-4.5.5nb11 ===> Patching for gromacs-4.5.5nb11 => Applying pkgsrc patches for gromacs-4.5.5nb11 ===> Creating toolchain wrappers for gromacs-4.5.5nb11 ===> Configuring for gromacs-4.5.5nb11 => Generating pkg-config files for builtin xz package. => Modifying GNU configure scripts to avoid --recheck => Replacing config-guess with pkgsrc versions => Replacing config-sub with pkgsrc versions => Replacing install-sh with pkgsrc version => Replacing Perl interpreter in scripts/demux.pl scripts/xplor2gmx.pl. => Fixing locale directory references. checking build system type... alpha--netbsd checking host system type... alpha--netbsd checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users checking whether build environment is sane... yes checking for a thread-safe mkdir -p... config/install-sh -c -d checking for gawk... /usr/bin/awk checking whether make sets $(MAKE)... yes checking how to create a ustar tar archive... gnutar checking for alpha--netbsd-cc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for alpha--netbsd-f77... gfortran checking whether we are using the GNU Fortran 77 compiler... no checking whether gfortran accepts -g... no checking dependency style of gcc... gcc3 checking for mpxlc... no checking for mpicc... mpicc checking whether the MPI cc command works... yes checking for MPI_IN_PLACE in collective operations... yes checking for catamount... no checking how to get verbose linking output from gfortran... configure: WARNING: compilation failed checking for Fortran 77 libraries of gfortran... checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... configure: error: in `/tmp/pkgbuild/biology/gromacs/work.alpha/gromacs-4.5.5': configure: error: cannot compile a simple Fortran program See `config.log' for more details. *** Error code 1 Stop. make[1]: stopped in /usr/pkgsrc/biology/gromacs WARNING: *** Please consider adding fortran to USE_LANGUAGES in the package Makefile. *** Error code 1 Stop. make: stopped in /usr/pkgsrc/biology/gromacs