=> Bootstrap dependency digest>=20010302: found digest-20190127 => Checksum SHA1 OK for htslib-1.10.2.tar.gz => Checksum RMD160 OK for htslib-1.10.2.tar.gz => Checksum SHA512 OK for htslib-1.10.2.tar.gz ===> Installing dependencies for htslib-1.10.2nb2 ========================================================================== The following variables will affect the build process of this package, htslib-1.10.2nb2. Their current value is shown below: * KRB5_DEFAULT = heimdal * SSLBASE = /usr * SSLCERTS = /etc/openssl/certs * SSLDIR = /etc/openssl * SSLKEYS = /etc/openssl/private Based on these variables, the following variables have been set: * KRB5BASE (defined, but empty) * KRB5_TYPE = heimdal You may want to abort the process now with CTRL-C and change their value before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Tool dependency automake>=1.9: found automake-1.16.3 => Tool dependency autoconf>=2.58: found autoconf-2.69nb10 => Tool dependency bash-[0-9]*: found bash-5.0.18 => Tool dependency gmake>=3.81: found gmake-4.2.1nb1 => Tool dependency perl>=5.0: found perl-5.32.0nb1 => Tool dependency distcc-[0-9]*: found distcc-3.3 => Build dependency cwrappers>=20150314: found cwrappers-20180325 => Full dependency curl>=7.70.0nb2: found curl-7.74.0 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Overriding tools for htslib-1.10.2nb2 ===> Extracting for htslib-1.10.2nb2 ===> Patching for htslib-1.10.2nb2 => Applying pkgsrc patches for htslib-1.10.2nb2 ===> Creating toolchain wrappers for htslib-1.10.2nb2 ===> Configuring for htslib-1.10.2nb2 => Substituting "version" in configure.ac cd /tmp/pkgbuild/biology/htslib/work.sparc64/htslib-1.10.2 && autoreconf -if => Modifying GNU configure scripts to avoid --recheck => Replacing config-guess with pkgsrc versions => Replacing config-sub with pkgsrc versions => Replacing install-sh with pkgsrc version => Replacing Perl interpreter in test/*.pl. => Adding run-time search paths to pkg-config files. checking for sparc64--netbsd-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for sparc64--netbsd-ranlib... no checking for ranlib... ranlib checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for C compiler warning flags... -Wall checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking shared library type for sparc64--netbsd... plain .so checking whether the compiler accepts -fvisibility=hidden... yes checking how to run the C preprocessor... gcc -E checking for egrep... (cached) /usr/bin/egrep checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... yes checking for gmtime_r... yes checking for fsync... yes checking for drand48... yes checking whether fdatasync is declared... yes checking for fdatasync... yes checking for library containing log... -lm checking for zlib.h... yes checking for inflate in -lz... yes checking for library containing recv... none required checking for bzlib.h... yes checking for BZ2_bzBuffToBuffCompress in -lbz2... yes checking for lzma.h... yes checking for lzma_easy_buffer_encode in -llzma... yes checking for libdeflate.h... no checking for libdeflate_deflate_compress in -ldeflate... no checking for curl_easy_pause in -lcurl... yes checking for CCHmac... no checking for library containing HMAC... -lcrypto checking whether PTHREAD_MUTEX_RECURSIVE is declared... yes configure: creating ./config.status config.status: creating config.mk config.status: creating htslib.pc.tmp config.status: creating config.h